WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12C8.3a.1 Sequence Name  C12C8.3a.1
Length (nt)  4796   Chromosome Location  I: 9334808-9342496
Chromosome . Primary Identifier  I Chromosome Location . Start  9334808
Chromosome Location . End  9342496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12C8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12C8.3a C12C8.3a 3444   I: 9335965-9336126

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3a.1 9334808 9342496 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25105   1319   I: 9334808-9336126 Caenorhabditis elegans
Exon25106   271   I: 9336173-9336443 Caenorhabditis elegans
Exon25110   678   I: 9336491-9337168 Caenorhabditis elegans
Exon25114   213   I: 9337214-9337426 Caenorhabditis elegans
Exon25118   372   I: 9337787-9338158 Caenorhabditis elegans
Exon25122   80   I: 9338208-9338287 Caenorhabditis elegans
Exon25128   314   I: 9338503-9338816 Caenorhabditis elegans
Exon25130   97   I: 9338856-9338952 Caenorhabditis elegans
Exon25134   124   I: 9340020-9340143 Caenorhabditis elegans
Exon25138   272   I: 9340198-9340469 Caenorhabditis elegans
Exon25142   272   I: 9340857-9341128 Caenorhabditis elegans
Exon25146   141   I: 9341176-9341316 Caenorhabditis elegans
Exon25150   50   I: 9341360-9341409 Caenorhabditis elegans
Exon25154   262   I: 9341453-9341714 Caenorhabditis elegans
Exon25158   152   I: 9341762-9341913 Caenorhabditis elegans
Exon25162   179   I: 9342318-9342496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3a.1 9334808 9342496 -1

1 Sequence

Length
4796

1 Sequence Ontology Term

Identifier Name Description
transcript