WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16A11.3d Sequence Name  F16A11.3d
Length (nt)  4689   Chromosome Location  I: 9364777-9364845
Chromosome . Primary Identifier  I Chromosome Location . Start  9364777
Chromosome Location . End  9364845
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.3d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44414 PPFR-1, isoform d 174.2 1562 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00084043
WBRNAi00084047
WBRNAi00044773
WBRNAi00050903
WBRNAi00004032
WBRNAi00084016
WBRNAi00084017
WBRNAi00116922
WBRNAi00084012
WBRNAi00093962
WBRNAi00093945
WBRNAi00093880
WBRNAi00084035
WBRNAi00084037
WBRNAi00084041
WBRNAi00084040
WBRNAi00084042
WBRNAi00084013
WBRNAi00084015
WBRNAi00084014
WBRNAi00084020
WBRNAi00117921
WBRNAi00084033

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16A11.3d 9364777 9364845 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16A11.3d 9364777 9364845 -1
CDS:F16A11.3d 9364890 9365150 -1
CDS:F16A11.3d 9365206 9365280 -1
CDS:F16A11.3d 9365336 9365621 -1
CDS:F16A11.3d 9365805 9365886 -1
CDS:F16A11.3d 9365933 9366033 -1
CDS:F16A11.3d 9366104 9366409 -1
CDS:F16A11.3d 9366463 9366584 -1
CDS:F16A11.3d 9366644 9366704 -1
CDS:F16A11.3d 9366823 9367386 -1
CDS:F16A11.3d 9367541 9367714 -1
CDS:F16A11.3d 9367845 9368106 -1
CDS:F16A11.3d 9368919 9369296 -1
CDS:F16A11.3d 9369867 9370021 -1
CDS:F16A11.3d 9370463 9370642 -1
CDS:F16A11.3d 9370777 9371219 -1
CDS:F16A11.3d 9371335 9371403 -1
CDS:F16A11.3d 9371456 9371515 -1
CDS:F16A11.3d 9371954 9372067 -1
CDS:F16A11.3d 9382472 9382630 -1
CDS:F16A11.3d 9388005 9388222 -1
CDS:F16A11.3d 9388666 9388799 -1
CDS:F16A11.3d 9388896 9389073 -1
CDS:F16A11.3d 9389563 9389633 -1
CDS:F16A11.3d 9389768 9389809 -1
CDS:F16A11.3d 9389858 9389982 -1

1 Sequence

Length
4689

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16A11.3d.1 F16A11.3d.1 4689   I: 9364777-9389982