WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16A11.1b.1 Sequence Name  F16A11.1b.1
Length (nt)  2383   Chromosome Location  I: 9393948-9398399
Chromosome . Primary Identifier  I Chromosome Location . Start  9393948
Chromosome Location . End  9398399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008876 F16A11.1 F16A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16A11.1b F16A11.1b 1866   I: 9394464-9394529

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16A11.1b.1 9393948 9398399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25354   582   I: 9393948-9394529 Caenorhabditis elegans
Exon25356   211   I: 9394822-9395032 Caenorhabditis elegans
Exon25358   742   I: 9395653-9396394 Caenorhabditis elegans
Exon25360   220   I: 9397015-9397234 Caenorhabditis elegans
Exon25362   303   I: 9397285-9397587 Caenorhabditis elegans
Exon25364   94   I: 9397925-9398018 Caenorhabditis elegans
Exon25366   162   I: 9398067-9398228 Caenorhabditis elegans
Exon25368   69   I: 9398331-9398399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16A11.1b.1 9393948 9398399 -1

1 Sequence

Length
2383

1 Sequence Ontology Term

Identifier Name Description
transcript