WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17E4.3.1 Sequence Name  C17E4.3.1
Length (nt)  1504   Chromosome Location  I: 9416704-9418885
Chromosome . Primary Identifier  I Chromosome Location . Start  9416704
Chromosome Location . End  9418885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17E4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007643 marc-3 C17E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17E4.3 C17E4.3 1296   I: 9416900-9417147

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17E4.3.1 9416704 9418885 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25394   444   I: 9416704-9417147 Caenorhabditis elegans
Exon25395   166   I: 9417645-9417810 Caenorhabditis elegans
Exon25396   141   I: 9417854-9417994 Caenorhabditis elegans
Exon25397   281   I: 9418042-9418322 Caenorhabditis elegans
Exon25398   236   I: 9418368-9418603 Caenorhabditis elegans
Exon25399   236   I: 9418650-9418885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17E4.3.1 9416704 9418885 -1

1 Sequence

Length
1504

1 Sequence Ontology Term

Identifier Name Description
transcript