WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17E4.5.1 Sequence Name  C17E4.5.1
Length (nt)  979   Chromosome Location  I: 9420912-9421992
Chromosome . Primary Identifier  I Chromosome Location . Start  9420912
Chromosome Location . End  9421992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17E4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003904 pabp-2 C17E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17E4.5 C17E4.5 618   I: 9421246-9421504

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17E4.5.1 9420912 9421992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25406   593   I: 9420912-9421504 Caenorhabditis elegans
Exon25407   293   I: 9421555-9421847 Caenorhabditis elegans
Exon25408   93   I: 9421900-9421992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17E4.5.1 9420912 9421992 -1

1 Sequence

Length
979

1 Sequence Ontology Term

Identifier Name Description
transcript