WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C17E4.6 Sequence Name  C17E4.6
Length (nt)  1176   Chromosome Location  I: 9422566-9422666
Chromosome . Primary Identifier  I Chromosome Location . Start  9422566
Chromosome Location . End  9422666
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17E4.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25780 VPS-72 43.7 391 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00040801
WBRNAi00002972
WBRNAi00002974
WBRNAi00081776
WBRNAi00081812
WBRNAi00081840
WBRNAi00029005
WBRNAi00114704
WBRNAi00081566
WBRNAi00062127
WBRNAi00116902
WBRNAi00112279

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C17E4.6 9422566 9422666 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007645 vps-72 C17E4.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C17E4.6 9422566 9422666 1
CDS:C17E4.6 9422716 9422875 1
CDS:C17E4.6 9422920 9423042 1
CDS:C17E4.6 9423090 9423412 1
CDS:C17E4.6 9423553 9423682 1
CDS:C17E4.6 9429793 9429960 1
CDS:C17E4.6 9430416 9430586 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C17E4.6.1 C17E4.6.1 1720   I: 9422556-9431120