WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30A10.1.1 Sequence Name  F30A10.1.1
Length (nt)  683   Chromosome Location  I: 9472642-9474801
Chromosome . Primary Identifier  I Chromosome Location . Start  9472642
Chromosome Location . End  9474801 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30A10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009260 calm-1 F30A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30A10.1 F30A10.1 606   I: 9472697-9472914

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.1.1 9472642 9474801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25488   273   I: 9472642-9472914 Caenorhabditis elegans
Exon25489   148   I: 9473209-9473356 Caenorhabditis elegans
Exon25490   153   I: 9473932-9474084 Caenorhabditis elegans
Exon25491   109   I: 9474693-9474801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.1.1 9472642 9474801 -1

1 Sequence

Length
683

1 Sequence Ontology Term

Identifier Name Description
transcript