WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30A10.8.1 Sequence Name  F30A10.8.1
Length (nt)  1554   Chromosome Location  I: 9501268-9505173
Chromosome . Primary Identifier  I Chromosome Location . Start  9501268
Chromosome Location . End  9505173 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30A10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006062 stn-1 F30A10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30A10.8 F30A10.8 1323   I: 9501322-9501417

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.8.1 9501268 9505173 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25543   150   I: 9501268-9501417 Caenorhabditis elegans
Exon25544   122   I: 9502876-9502997 Caenorhabditis elegans
Exon25547   916   I: 9503439-9504354 Caenorhabditis elegans
Exon25551   96   I: 9504466-9504561 Caenorhabditis elegans
Exon25554   104   I: 9504728-9504831 Caenorhabditis elegans
Exon25558   166   I: 9505008-9505173 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.8.1 9501268 9505173 1

1 Sequence

Length
1554

1 Sequence Ontology Term

Identifier Name Description
transcript