WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30A10.10b.1 Sequence Name  F30A10.10b.1
Length (nt)  4147   Chromosome Location  I: 9506547-9511184
Chromosome . Primary Identifier  I Chromosome Location . Start  9506547
Chromosome Location . End  9511184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30A10.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009267 usp-48 F30A10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30A10.10b F30A10.10b 3789   I: 9506556-9506737

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.10b.1 9506547 9511184 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25563   191   I: 9506547-9506737 Caenorhabditis elegans
Exon25566   258   I: 9506790-9507047 Caenorhabditis elegans
Exon25568   82   I: 9507098-9507179 Caenorhabditis elegans
Exon25570   302   I: 9507228-9507529 Caenorhabditis elegans
Exon25572   335   I: 9507574-9507908 Caenorhabditis elegans
Exon25574   1096   I: 9508005-9509100 Caenorhabditis elegans
Exon25576   274   I: 9509148-9509421 Caenorhabditis elegans
Exon25578   657   I: 9509469-9510125 Caenorhabditis elegans
Exon25580   495   I: 9510177-9510671 Caenorhabditis elegans
Exon25582   457   I: 9510728-9511184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.10b.1 9506547 9511184 1

1 Sequence

Length
4147

1 Sequence Ontology Term

Identifier Name Description
transcript