WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F30A10.10a.1 Sequence Name  F30A10.10a.1
Length (nt)  4145   Chromosome Location  I: 9506553-9511182
Chromosome . Primary Identifier  I Chromosome Location . Start  9506553
Chromosome Location . End  9511182 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30A10.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009267 usp-48 F30A10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F30A10.10a F30A10.10a 3795   I: 9506556-9506737

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.10a.1 9506553 9511182 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25564   185   I: 9506553-9506737 Caenorhabditis elegans
Exon25565   258   I: 9506790-9507047 Caenorhabditis elegans
Exon25567   82   I: 9507098-9507179 Caenorhabditis elegans
Exon25569   302   I: 9507228-9507529 Caenorhabditis elegans
Exon25571   335   I: 9507574-9507908 Caenorhabditis elegans
Exon25573   1096   I: 9508005-9509100 Caenorhabditis elegans
Exon25575   274   I: 9509148-9509421 Caenorhabditis elegans
Exon25577   663   I: 9509463-9510125 Caenorhabditis elegans
Exon25579   495   I: 9510177-9510671 Caenorhabditis elegans
Exon25581   455   I: 9510728-9511182 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F30A10.10a.1 9506553 9511182 1

1 Sequence

Length
4145

1 Sequence Ontology Term

Identifier Name Description
transcript