WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F30A10.10b Sequence Name  F30A10.10b
Length (nt)  3789   Chromosome Location  I: 9506556-9506737
Chromosome . Primary Identifier  I Chromosome Location . Start  9506556
Chromosome Location . End  9506737
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F30A10.10b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53715 USP-48, isoform b 144.2 1262 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00070441
WBRNAi00094628
WBRNAi00045950
WBRNAi00025321
WBRNAi00025322
WBRNAi00099882
WBRNAi00085982
WBRNAi00077890
WBRNAi00003531
WBRNAi00076361
WBRNAi00081785
WBRNAi00081820
WBRNAi00081849
WBRNAi00099680
WBRNAi00099276
WBRNAi00099478
WBRNAi00089610
WBRNAi00089640
WBRNAi00085978
WBRNAi00085977
WBRNAi00085980
WBRNAi00085979
WBRNAi00085981
WBRNAi00081880
WBRNAi00081629
WBRNAi00007746
WBRNAi00007818
WBRNAi00070440
WBRNAi00070439
WBRNAi00117952

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F30A10.10b 9506556 9506737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009267 usp-48 F30A10.10 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F30A10.10b 9506556 9506737 1
CDS:F30A10.10b 9506790 9507047 1
CDS:F30A10.10b 9507098 9507179 1
CDS:F30A10.10b 9507228 9507529 1
CDS:F30A10.10b 9507574 9507908 1
CDS:F30A10.10b 9508005 9509100 1
CDS:F30A10.10b 9509148 9509421 1
CDS:F30A10.10b 9509469 9510125 1
CDS:F30A10.10b 9510177 9510671 1
CDS:F30A10.10b 9510728 9510835 1

1 Sequence

Length
3789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F30A10.10b.1 F30A10.10b.1 4147   I: 9506547-9511184