WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36F7.4g.1 Sequence Name  C36F7.4g.1
Length (nt)  1378   Chromosome Location  I: 9565389-9574377
Chromosome . Primary Identifier  I Chromosome Location . Start  9565389
Chromosome Location . End  9574377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36F7.4g C36F7.4g 1275   I: 9565492-9565577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4g.1 9565389 9574377 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25713   189   I: 9565389-9565577 Caenorhabditis elegans
Exon25734   45   I: 9566694-9566738 Caenorhabditis elegans
Exon25742   136   I: 9566917-9567052 Caenorhabditis elegans
Exon25750   152   I: 9567234-9567385 Caenorhabditis elegans
Exon25758   129   I: 9568102-9568230 Caenorhabditis elegans
Exon25764   162   I: 9571024-9571185 Caenorhabditis elegans
Exon25772   79   I: 9572150-9572228 Caenorhabditis elegans
Exon25779   141   I: 9572276-9572416 Caenorhabditis elegans
Exon25786   116   I: 9572480-9572595 Caenorhabditis elegans
Exon25794   229   I: 9574149-9574377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4g.1 9565389 9574377 -1

1 Sequence

Length
1378

1 Sequence Ontology Term

Identifier Name Description
transcript