WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36F7.4a.2 Sequence Name  C36F7.4a.2
Length (nt)  1095   Chromosome Location  I: 9565394-9574169
Chromosome . Primary Identifier  I Chromosome Location . Start  9565394
Chromosome Location . End  9574169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36F7.4a C36F7.4a 843   I: 9565492-9565577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4a.2 9565394 9574169 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25714   184   I: 9565394-9565577 Caenorhabditis elegans
Exon25728   45   I: 9566694-9566738 Caenorhabditis elegans
Exon25736   136   I: 9566917-9567052 Caenorhabditis elegans
Exon25744   152   I: 9567234-9567385 Caenorhabditis elegans
Exon25753   129   I: 9568102-9568230 Caenorhabditis elegans
Exon25767   79   I: 9572150-9572228 Caenorhabditis elegans
Exon25774   141   I: 9572276-9572416 Caenorhabditis elegans
Exon25781   116   I: 9572480-9572595 Caenorhabditis elegans
Exon25787   92   I: 9573669-9573760 Caenorhabditis elegans
Exon25789   21   I: 9574149-9574169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4a.2 9565394 9574169 -1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript