WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36F7.4e.1 Sequence Name  C36F7.4e.1
Length (nt)  1449   Chromosome Location  I: 9565492-9574377
Chromosome . Primary Identifier  I Chromosome Location . Start  9565492
Chromosome Location . End  9574377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36F7.4e C36F7.4e 1449   I: 9565492-9565577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4e.1 9565492 9574377 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25720   86   I: 9565492-9565577 Caenorhabditis elegans
Exon25723   96   I: 9566048-9566143 Caenorhabditis elegans
Exon25725   78   I: 9566375-9566452 Caenorhabditis elegans
Exon25732   45   I: 9566694-9566738 Caenorhabditis elegans
Exon25740   136   I: 9566917-9567052 Caenorhabditis elegans
Exon25748   152   I: 9567234-9567385 Caenorhabditis elegans
Exon25756   129   I: 9568102-9568230 Caenorhabditis elegans
Exon25762   162   I: 9571024-9571185 Caenorhabditis elegans
Exon25770   79   I: 9572150-9572228 Caenorhabditis elegans
Exon25777   141   I: 9572276-9572416 Caenorhabditis elegans
Exon25784   116   I: 9572480-9572595 Caenorhabditis elegans
Exon25793   229   I: 9574149-9574377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4e.1 9565492 9574377 -1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
transcript