WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42H11.2.1 Sequence Name  F42H11.2.1
Length (nt)  2306   Chromosome Location  I: 9578526-9581267
Chromosome . Primary Identifier  I Chromosome Location . Start  9578526
Chromosome Location . End  9581267 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42H11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002276 lem-3 F42H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42H11.2 F42H11.2 2115   I: 9578717-9578846

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42H11.2.1 9578526 9581267 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25806   321   I: 9578526-9578846 Caenorhabditis elegans
Exon25807   77   I: 9578897-9578973 Caenorhabditis elegans
Exon25808   86   I: 9579019-9579104 Caenorhabditis elegans
Exon25809   370   I: 9579153-9579522 Caenorhabditis elegans
Exon25810   1123   I: 9579713-9580835 Caenorhabditis elegans
Exon25811   175   I: 9580889-9581063 Caenorhabditis elegans
Exon25812   154   I: 9581114-9581267 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42H11.2.1 9578526 9581267 -1

1 Sequence

Length
2306

1 Sequence Ontology Term

Identifier Name Description
transcript