WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A1.2.1 Sequence Name  K07A1.2.1
Length (nt)  1549   Chromosome Location  I: 9585417-9587203
Chromosome . Primary Identifier  I Chromosome Location . Start  9585417
Chromosome Location . End  9587203 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010609 dut-1 K07A1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A1.2 K07A1.2 1476   I: 9585421-9585801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A1.2.1 9585417 9587203 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25826   385   I: 9585417-9585801 Caenorhabditis elegans
Exon25827   122   I: 9585848-9585969 Caenorhabditis elegans
Exon25828   346   I: 9586016-9586361 Caenorhabditis elegans
Exon25829   122   I: 9586411-9586532 Caenorhabditis elegans
Exon25830   367   I: 9586579-9586945 Caenorhabditis elegans
Exon25831   207   I: 9586997-9587203 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A1.2.1 9585417 9587203 1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript