WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A1.8.1 Sequence Name  K07A1.8.1
Length (nt)  1754   Chromosome Location  I: 9609544-9611534
Chromosome . Primary Identifier  I Chromosome Location . Start  9609544
Chromosome Location . End  9611534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002070 ile-1 K07A1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A1.8 K07A1.8 1479   I: 9609817-9610062

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A1.8.1 9609544 9611534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25888   519   I: 9609544-9610062 Caenorhabditis elegans
Exon25890   719   I: 9610112-9610830 Caenorhabditis elegans
Exon25891   250   I: 9610875-9611124 Caenorhabditis elegans
Exon25892   114   I: 9611169-9611282 Caenorhabditis elegans
Exon25893   70   I: 9611331-9611400 Caenorhabditis elegans
Exon25894   82   I: 9611453-9611534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A1.8.1 9609544 9611534 -1

1 Sequence

Length
1754

1 Sequence Ontology Term

Identifier Name Description
transcript