WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05F1.6.1 Sequence Name  T05F1.6.1
Length (nt)  4022   Chromosome Location  I: 9626241-9630848
Chromosome . Primary Identifier  I Chromosome Location . Start  9626241
Chromosome Location . End  9630848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05F1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002027 hsr-9 T05F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05F1.6 T05F1.6 3498   I: 9626275-9626299

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.6.1 9626241 9630848 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25974   59   I: 9626241-9626299 Caenorhabditis elegans
Exon25975   37   I: 9626467-9626503 Caenorhabditis elegans
Exon25976   67   I: 9626551-9626617 Caenorhabditis elegans
Exon25977   429   I: 9626662-9627090 Caenorhabditis elegans
Exon25978   1206   I: 9627139-9628344 Caenorhabditis elegans
Exon25979   109   I: 9628392-9628500 Caenorhabditis elegans
Exon25980   1040   I: 9628549-9629588 Caenorhabditis elegans
Exon25981   215   I: 9629635-9629849 Caenorhabditis elegans
Exon25982   286   I: 9629943-9630228 Caenorhabditis elegans
Exon25983   574   I: 9630275-9630848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.6.1 9626241 9630848 1

1 Sequence

Length
4022

1 Sequence Ontology Term

Identifier Name Description
transcript