WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05F1.5 Sequence Name  T05F1.5
Length (nt)  1101   Chromosome Location  I: 9633238-9633300
Chromosome . Primary Identifier  I Chromosome Location . Start  9633238
Chromosome Location . End  9633300
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05F1.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23949 T05F1.5 40.9 366 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052542
WBRNAi00004141

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05F1.5 9633238 9633300 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011491 T05F1.5 T05F1.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05F1.5 9633238 9633300 -1
CDS:T05F1.5 9633343 9633454 -1
CDS:T05F1.5 9633502 9633738 -1
CDS:T05F1.5 9633798 9634111 -1
CDS:T05F1.5 9634164 9634268 -1
CDS:T05F1.5 9634444 9634554 -1
CDS:T05F1.5 9634629 9634706 -1
CDS:T05F1.5 9634767 9634847 -1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05F1.5.2 T05F1.5.2 1162   I: 9633183-9634853
Transcript:T05F1.5.1 T05F1.5.1 1266   I: 9633183-9635945