WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05F1.8.1 Sequence Name  T05F1.8.1
Length (nt)  1354   Chromosome Location  I: 9642344-9643834
Chromosome . Primary Identifier  I Chromosome Location . Start  9642344
Chromosome Location . End  9643834 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05F1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011493 T05F1.8 T05F1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05F1.8 T05F1.8 1182   I: 9642492-9642725

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.8.1 9642344 9643834 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26017   99   I: 9642344-9642442 Caenorhabditis elegans
Exon26019   238   I: 9642488-9642725 Caenorhabditis elegans
Exon26020   729   I: 9642774-9643502 Caenorhabditis elegans
Exon26022   288   I: 9643547-9643834 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.8.1 9642344 9643834 1

1 Sequence

Length
1354

1 Sequence Ontology Term

Identifier Name Description
transcript