WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05F1.13.1 Sequence Name  T05F1.13.1
Length (nt)  1287   Chromosome Location  I: 9650499-9652946
Chromosome . Primary Identifier  I Chromosome Location . Start  9650499
Chromosome Location . End  9652946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05F1.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011497 T05F1.13 T05F1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05F1.13 T05F1.13 1050   I: 9650604-9650677

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.13.1 9650499 9652946 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26039   179   I: 9650499-9650677 Caenorhabditis elegans
Exon26040   107   I: 9650830-9650936 Caenorhabditis elegans
Exon26041   157   I: 9650981-9651137 Caenorhabditis elegans
Exon26042   310   I: 9651504-9651813 Caenorhabditis elegans
Exon26043   293   I: 9652131-9652423 Caenorhabditis elegans
Exon26044   241   I: 9652706-9652946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05F1.13.1 9650499 9652946 1

1 Sequence

Length
1287

1 Sequence Ontology Term

Identifier Name Description
transcript