WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03D6.3a.1 Sequence Name  C03D6.3a.1
Length (nt)  2146   Chromosome Location  I: 9665251-9668650
Chromosome . Primary Identifier  I Chromosome Location . Start  9665251
Chromosome Location . End  9668650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03D6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000466 cel-1 C03D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03D6.3a C03D6.3a 1872   I: 9665311-9665391

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03D6.3a.1 9665251 9668650 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26069   141   I: 9665251-9665391 Caenorhabditis elegans
Exon26071   183   I: 9665440-9665622 Caenorhabditis elegans
Exon26073   201   I: 9665674-9665874 Caenorhabditis elegans
Exon26075   226   I: 9666073-9666298 Caenorhabditis elegans
Exon26077   128   I: 9666345-9666472 Caenorhabditis elegans
Exon26079   128   I: 9666520-9666647 Caenorhabditis elegans
Exon26081   145   I: 9666698-9666842 Caenorhabditis elegans
Exon26083   66   I: 9666887-9666952 Caenorhabditis elegans
Exon26085   237   I: 9666998-9667234 Caenorhabditis elegans
Exon26087   86   I: 9667285-9667370 Caenorhabditis elegans
Exon26089   154   I: 9667424-9667577 Caenorhabditis elegans
Exon26091   119   I: 9667650-9667768 Caenorhabditis elegans
Exon26093   332   I: 9668319-9668650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03D6.3a.1 9665251 9668650 1

1 Sequence

Length
2146

1 Sequence Ontology Term

Identifier Name Description
transcript