WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04F12.1b.1 Sequence Name  C04F12.1b.1
Length (nt)  3088   Chromosome Location  I: 9673668-9678555
Chromosome . Primary Identifier  I Chromosome Location . Start  9673668
Chromosome Location . End  9678555 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007297 vsra-1 C04F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04F12.1b C04F12.1b 2841   I: 9673858-9673975

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04F12.1b.1 9673668 9678555 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26103   308   I: 9673668-9673975 Caenorhabditis elegans
Exon26105   298   I: 9674026-9674323 Caenorhabditis elegans
Exon26107   340   I: 9674666-9675005 Caenorhabditis elegans
Exon26109   115   I: 9675408-9675522 Caenorhabditis elegans
Exon26111   87   I: 9675723-9675809 Caenorhabditis elegans
Exon26113   155   I: 9675861-9676015 Caenorhabditis elegans
Exon26115   243   I: 9676062-9676304 Caenorhabditis elegans
Exon26117   569   I: 9676350-9676918 Caenorhabditis elegans
Exon26119   831   I: 9677056-9677886 Caenorhabditis elegans
Exon26120   142   I: 9678414-9678555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04F12.1b.1 9673668 9678555 -1

1 Sequence

Length
3088

1 Sequence Ontology Term

Identifier Name Description
transcript