WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04F12.3.1 Sequence Name  C04F12.3.1
Length (nt)  2011   Chromosome Location  I: 9685398-9688653
Chromosome . Primary Identifier  I Chromosome Location . Start  9685398
Chromosome Location . End  9688653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002069 ikb-1 C04F12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04F12.3 C04F12.3 1794   I: 9685554-9685625

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04F12.3.1 9685398 9688653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26127   228   I: 9685398-9685625 Caenorhabditis elegans
Exon26128   124   I: 9686172-9686295 Caenorhabditis elegans
Exon26129   83   I: 9686345-9686427 Caenorhabditis elegans
Exon26130   248   I: 9686571-9686818 Caenorhabditis elegans
Exon26131   83   I: 9686869-9686951 Caenorhabditis elegans
Exon26132   134   I: 9687261-9687394 Caenorhabditis elegans
Exon26133   270   I: 9687451-9687720 Caenorhabditis elegans
Exon26134   346   I: 9687768-9688113 Caenorhabditis elegans
Exon26135   495   I: 9688159-9688653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04F12.3.1 9685398 9688653 1

1 Sequence

Length
2011

1 Sequence Ontology Term

Identifier Name Description
transcript