WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C2.2b.1 Sequence Name  C16C2.2b.1
Length (nt)  2371   Chromosome Location  I: 9722716-9726284
Chromosome . Primary Identifier  I Chromosome Location . Start  9722716
Chromosome Location . End  9726284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001145 eat-16 C16C2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C2.2b C16C2.2b 1296   I: 9722804-9722824

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.2b.1 9722716 9726284 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26211   109   I: 9722716-9722824 Caenorhabditis elegans
Exon26214   120   I: 9722875-9722994 Caenorhabditis elegans
Exon26216   84   I: 9723105-9723188 Caenorhabditis elegans
Exon26218   94   I: 9723253-9723346 Caenorhabditis elegans
Exon26220   79   I: 9723391-9723469 Caenorhabditis elegans
Exon26222   297   I: 9723847-9724143 Caenorhabditis elegans
Exon26224   114   I: 9724281-9724394 Caenorhabditis elegans
Exon26225   473   I: 9724442-9724914 Caenorhabditis elegans
Exon26227   118   I: 9724967-9725084 Caenorhabditis elegans
Exon26230   883   I: 9725402-9726284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.2b.1 9722716 9726284 1

1 Sequence

Length
2371

1 Sequence Ontology Term

Identifier Name Description
transcript