WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26E4.1.1 Sequence Name  F26E4.1.1
Length (nt)  2528   Chromosome Location  I: 9754122-9757900
Chromosome . Primary Identifier  I Chromosome Location . Start  9754122
Chromosome Location . End  9757900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26E4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006352 sur-6 F26E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26E4.1 F26E4.1 1488   I: 9754238-9754433

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26E4.1.1 9754122 9757900 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26308   312   I: 9754122-9754433 Caenorhabditis elegans
Exon26309   98   I: 9754772-9754869 Caenorhabditis elegans
Exon26310   257   I: 9754924-9755180 Caenorhabditis elegans
Exon26311   136   I: 9755230-9755365 Caenorhabditis elegans
Exon26312   70   I: 9755613-9755682 Caenorhabditis elegans
Exon26313   165   I: 9755734-9755898 Caenorhabditis elegans
Exon26314   125   I: 9755947-9756071 Caenorhabditis elegans
Exon26315   137   I: 9756121-9756257 Caenorhabditis elegans
Exon26316   175   I: 9756304-9756478 Caenorhabditis elegans
Exon26317   1053   I: 9756848-9757900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26E4.1.1 9754122 9757900 1

1 Sequence

Length
2528

1 Sequence Ontology Term

Identifier Name Description
transcript