WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200924 Gene Name  F35C12.5
Sequence Name  ? F35C12.5 Organism  Caenorhabditis elegans
Automated Description  Enriched in AFD and ASER based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 165
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200924

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35C12.5 F35C12.5 165   I: 9806796-9806960
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk962858
gk962706
gk963902
gk963849
tm7484
WBVar01347554
WBVar01347555
gk963406

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00200924 9806796 9806960 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in AFD neuron cells comparing to in whole animal, according to dissected single neuron RNASeq analysis. Fold change >= 4. WBPaper00050344:AFD-neuron_enriched
  Transcripts that showed significantly increased expression in ASER neuron cells comparing to in whole animal, according to dissected single neuron RNASeq analysis. Fold change >= 4. WBPaper00050344:ASER-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00200924 9806796 9806960 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
165

1 Sequence Ontology Term