WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C12.2a.1 Sequence Name  F35C12.2a.1
Length (nt)  2054   Chromosome Location  I: 9808904-9813075
Chromosome . Primary Identifier  I Chromosome Location . Start  9808904
Chromosome Location . End  9813075 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003569 ncx-4 F35C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C12.2a F35C12.2a 1791   I: 9808904-9809118

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C12.2a.1 9808904 9813075 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26438   215   I: 9808904-9809118 Caenorhabditis elegans
Exon26439   314   I: 9809273-9809586 Caenorhabditis elegans
Exon26440   152   I: 9809646-9809797 Caenorhabditis elegans
Exon26441   180   I: 9809842-9810021 Caenorhabditis elegans
Exon26442   136   I: 9810067-9810202 Caenorhabditis elegans
Exon26443   122   I: 9810699-9810820 Caenorhabditis elegans
Exon26444   138   I: 9810871-9811008 Caenorhabditis elegans
Exon26445   176   I: 9812183-9812358 Caenorhabditis elegans
Exon26447   256   I: 9812408-9812663 Caenorhabditis elegans
Exon26450   365   I: 9812711-9813075 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C12.2a.1 9808904 9813075 1

1 Sequence

Length
2054

1 Sequence Ontology Term

Identifier Name Description
transcript