WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67A6A.2c.1 Sequence Name  Y67A6A.2c.1
Length (nt)  1650   Chromosome Location  I: 9839600-9844809
Chromosome . Primary Identifier  I Chromosome Location . Start  9839600
Chromosome Location . End  9844809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67A6A.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003652 nhr-62 Y67A6A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67A6A.2c Y67A6A.2c 1539   I: 9839609-9839855

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67A6A.2c.1 9839600 9844809 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26470   256   I: 9839600-9839855 Caenorhabditis elegans
Exon26472   127   I: 9840997-9841123 Caenorhabditis elegans
Exon26474   59   I: 9842690-9842748 Caenorhabditis elegans
Exon26476   792   I: 9843443-9844234 Caenorhabditis elegans
Exon26481   197   I: 9844298-9844494 Caenorhabditis elegans
Exon26486   219   I: 9844591-9844809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67A6A.2c.1 9839600 9844809 1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript