WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10C3.3.1 Sequence Name  K10C3.3.1
Length (nt)  1020   Chromosome Location  I: 9847406-9850082
Chromosome . Primary Identifier  I Chromosome Location . Start  9847406
Chromosome Location . End  9850082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006978 zig-1 K10C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10C3.3 K10C3.3 798   I: 9847407-9847574

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10C3.3.1 9847406 9850082 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26487   169   I: 9847406-9847574 Caenorhabditis elegans
Exon26488   115   I: 9847621-9847735 Caenorhabditis elegans
Exon26489   69   I: 9848522-9848590 Caenorhabditis elegans
Exon26490   86   I: 9848658-9848743 Caenorhabditis elegans
Exon26491   85   I: 9848939-9849023 Caenorhabditis elegans
Exon26492   162   I: 9849074-9849235 Caenorhabditis elegans
Exon26493   334   I: 9849749-9850082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10C3.3.1 9847406 9850082 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript