WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K10C3.4a Sequence Name  K10C3.4a
Length (nt)  1113   Chromosome Location  I: 9860503-9860616
Chromosome . Primary Identifier  I Chromosome Location . Start  9860503
Chromosome Location . End  9860616
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12080 K10C3.4, isoform a 41.7 370 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00034243
WBRNAi00050500
WBRNAi00003975
WBRNAi00116583
WBRNAi00061851

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K10C3.4a 9860503 9860616 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010731 K10C3.4 K10C3.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:K10C3.4a 9860503 9860616 1
CDS:K10C3.4a 9860665 9861180 1
CDS:K10C3.4a 9861226 9861463 1
CDS:K10C3.4a 9861513 9861678 1
CDS:K10C3.4a 9862221 9862299 1

1 Sequence

Length
1113

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K10C3.4a.2 K10C3.4a.2 2460   I: 9853654-9863495
Transcript:K10C3.4a.1 K10C3.4a.1 2466   I: 9853654-9863495
Transcript:K10C3.4a.3 K10C3.4a.3 2403   I: 9859262-9863495
Transcript:K10C3.4a.4 K10C3.4a.4 2394   I: 9859265-9863495
Transcript:K10C3.4a.5 K10C3.4a.5 2321   I: 9860491-9863495