WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23H4.1a.1 Sequence Name  T23H4.1a.1
Length (nt)  1549   Chromosome Location  I: 9876528-9879216
Chromosome . Primary Identifier  I Chromosome Location . Start  9876528
Chromosome Location . End  9879216 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23H4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002142 inx-20 T23H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23H4.1a T23H4.1a 1452   I: 9876528-9876604

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23H4.1a.1 9876528 9879216 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26600   77   I: 9876528-9876604 Caenorhabditis elegans
Exon26601   115   I: 9876968-9877082 Caenorhabditis elegans
Exon26604   88   I: 9877126-9877213 Caenorhabditis elegans
Exon26607   86   I: 9877252-9877337 Caenorhabditis elegans
Exon26610   251   I: 9877443-9877693 Caenorhabditis elegans
Exon26613   97   I: 9877742-9877838 Caenorhabditis elegans
Exon26616   207   I: 9877902-9878108 Caenorhabditis elegans
Exon26619   177   I: 9878159-9878335 Caenorhabditis elegans
Exon26622   124   I: 9878382-9878505 Caenorhabditis elegans
Exon26625   93   I: 9878551-9878643 Caenorhabditis elegans
Exon26629   234   I: 9878983-9879216 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23H4.1a.1 9876528 9879216 1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript