WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52F12.3.1 Sequence Name  F52F12.3.1
Length (nt)  2119   Chromosome Location  I: 9895692-9900817
Chromosome . Primary Identifier  I Chromosome Location . Start  9895692
Chromosome Location . End  9900817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52F12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003396 mom-4 F52F12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52F12.3 F52F12.3 1611   I: 9895982-9896117

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.3.1 9895692 9900817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26681   426   I: 9895692-9896117 Caenorhabditis elegans
Exon26682   116   I: 9896658-9896773 Caenorhabditis elegans
Exon26683   112   I: 9896825-9896936 Caenorhabditis elegans
Exon26684   104   I: 9897625-9897728 Caenorhabditis elegans
Exon26685   219   I: 9897778-9897996 Caenorhabditis elegans
Exon26686   382   I: 9898340-9898721 Caenorhabditis elegans
Exon26687   127   I: 9899335-9899461 Caenorhabditis elegans
Exon26688   80   I: 9899879-9899958 Caenorhabditis elegans
Exon26689   99   I: 9900004-9900102 Caenorhabditis elegans
Exon26690   167   I: 9900206-9900372 Caenorhabditis elegans
Exon26691   287   I: 9900531-9900817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52F12.3.1 9895692 9900817 -1

1 Sequence

Length
2119

1 Sequence Ontology Term

Identifier Name Description
transcript