WormMine: Gene WBGene00199928

• WormBase Gene ID: WBGene00199928
• Gene Name: F52F12.16
• Sequence Name: F52F12.16
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by daf-2 based on microarray studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 150

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00199928

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F52F12.16	F52F12.16	150	I: 9914348-9914497

Other

0 CDSs

0 RNAi Result

8 Allele

• gk962858
• gk962706
• gk963902
• gk963849
• gk964406
• gk119713
• gk964407
• WBVar00538775

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00199928
• Start: 9914348
• End: 9914497
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrI_9914498..9914946
• Length (nt): 449
• Chromosome Location: I: 9914498-9914946
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_downregulated
Hypoxia: 0.5% oxygen 2 hours.	Transcripts that showed significantly increased expression after hypoxia in an egl-9 / hif-1 independent manner.	DESeq2 p-value <0.05, expression of hypoxia vs. normxia >= 2, expression in egl09(sa307) vs N2 < 2, expression of egl-9(sa307); hif-1(ia04) vs N2 <= 2.	WBPaper00055344:hypoxia_regulated_HIF-1_independent

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00199928
• Start: 9914348
• End: 9914497
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 150

1 Sequence Ontology Term