WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24D1.1a.1 Sequence Name  T24D1.1a.1
Length (nt)  2835   Chromosome Location  I: 9949105-9953391
Chromosome . Primary Identifier  I Chromosome Location . Start  9949105
Chromosome Location . End  9953391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24D1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005023 sqv-5 T24D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24D1.1a T24D1.1a 2181   I: 9949108-9949769

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24D1.1a.1 9949105 9953391 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26801   665   I: 9949105-9949769 Caenorhabditis elegans
Exon26802   484   I: 9950210-9950693 Caenorhabditis elegans
Exon26805   428   I: 9950942-9951369 Caenorhabditis elegans
Exon26808   346   I: 9951570-9951915 Caenorhabditis elegans
Exon26811   78   I: 9951966-9952043 Caenorhabditis elegans
Exon26816   834   I: 9952558-9953391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24D1.1a.1 9949105 9953391 1

1 Sequence

Length
2835

1 Sequence Ontology Term

Identifier Name Description
transcript