WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23D8.9b.1 Sequence Name  T23D8.9b.1
Length (nt)  2878   Chromosome Location  I: 9980063-9984786
Chromosome . Primary Identifier  I Chromosome Location . Start  9980063
Chromosome Location . End  9984786 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23D8.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006379 sys-1 T23D8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.9b T23D8.9b 720   I: 9982656-9982683

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9b.1 9980063 9984786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26870   514   I: 9980063-9980576 Caenorhabditis elegans
Exon26874   505   I: 9980629-9981133 Caenorhabditis elegans
Exon26877   327   I: 9981185-9981511 Caenorhabditis elegans
Exon26880   226   I: 9981743-9981968 Caenorhabditis elegans
Exon26883   536   I: 9982025-9982560 Caenorhabditis elegans
Exon26886   78   I: 9982606-9982683 Caenorhabditis elegans
Exon26890   119   I: 9982739-9982857 Caenorhabditis elegans
Exon26893   313   I: 9982896-9983208 Caenorhabditis elegans
Exon26895   185   I: 9984240-9984424 Caenorhabditis elegans
Exon26896   75   I: 9984712-9984786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9b.1 9980063 9984786 -1

1 Sequence

Length
2878

1 Sequence Ontology Term

Identifier Name Description
transcript