WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23D8.9a.1 Sequence Name  T23D8.9a.1
Length (nt)  2875   Chromosome Location  I: 9980063-9984794
Chromosome . Primary Identifier  I Chromosome Location . Start  9980063
Chromosome Location . End  9984794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23D8.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006379 sys-1 T23D8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.9a T23D8.9a 2436   I: 9980494-9980576

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9a.1 9980063 9984794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26871   514   I: 9980063-9980576 Caenorhabditis elegans
Exon26873   505   I: 9980629-9981133 Caenorhabditis elegans
Exon26876   327   I: 9981185-9981511 Caenorhabditis elegans
Exon26879   226   I: 9981743-9981968 Caenorhabditis elegans
Exon26882   536   I: 9982025-9982560 Caenorhabditis elegans
Exon26885   78   I: 9982606-9982683 Caenorhabditis elegans
Exon26888   108   I: 9982739-9982846 Caenorhabditis elegans
Exon26892   313   I: 9982896-9983208 Caenorhabditis elegans
Exon26894   185   I: 9984240-9984424 Caenorhabditis elegans
Exon26897   83   I: 9984712-9984794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9a.1 9980063 9984794 -1

1 Sequence

Length
2875

1 Sequence Ontology Term

Identifier Name Description
transcript