WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23D8.9c.1 Sequence Name  T23D8.9c.1
Length (nt)  2037   Chromosome Location  I: 9980494-9983069
Chromosome . Primary Identifier  I Chromosome Location . Start  9980494
Chromosome Location . End  9983069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23D8.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006379 sys-1 T23D8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.9c T23D8.9c 2037   I: 9980494-9980576

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9c.1 9980494 9983069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26872   83   I: 9980494-9980576 Caenorhabditis elegans
Exon26875   505   I: 9980629-9981133 Caenorhabditis elegans
Exon26878   327   I: 9981185-9981511 Caenorhabditis elegans
Exon26881   226   I: 9981743-9981968 Caenorhabditis elegans
Exon26884   536   I: 9982025-9982560 Caenorhabditis elegans
Exon26887   78   I: 9982606-9982683 Caenorhabditis elegans
Exon26889   108   I: 9982739-9982846 Caenorhabditis elegans
Exon26891   174   I: 9982896-9983069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.9c.1 9980494 9983069 -1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
transcript