WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23D8.7.1 Sequence Name  T23D8.7.1
Length (nt)  3105   Chromosome Location  I: 9989802-9993976
Chromosome . Primary Identifier  I Chromosome Location . Start  9989802
Chromosome Location . End  9993976 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23D8.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011945 alg-5 T23D8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.7 T23D8.7 2718   I: 9989804-9989923

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.7.1 9989802 9993976 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26901   122   I: 9989802-9989923 Caenorhabditis elegans
Exon26902   68   I: 9989975-9990042 Caenorhabditis elegans
Exon26903   375   I: 9990087-9990461 Caenorhabditis elegans
Exon26904   961   I: 9990516-9991476 Caenorhabditis elegans
Exon26905   131   I: 9991544-9991674 Caenorhabditis elegans
Exon26906   700   I: 9991904-9992603 Caenorhabditis elegans
Exon26907   192   I: 9993128-9993319 Caenorhabditis elegans
Exon26908   135   I: 9993365-9993499 Caenorhabditis elegans
Exon26909   421   I: 9993556-9993976 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23D8.7.1 9989802 9993976 1

1 Sequence

Length
3105

1 Sequence Ontology Term

Identifier Name Description
transcript