WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G8.3.2 Sequence Name  F10G8.3.2
Length (nt)  1781   Chromosome Location  I: 10026188-10030059
Chromosome . Primary Identifier  I Chromosome Location . Start  10026188
Chromosome Location . End  10030059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G8.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003803 rae-1 F10G8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G8.3 F10G8.3 1122   I: 10026644-10026751

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.3.2 10026188 10030059 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26972   32   I: 10026188-10026219 Caenorhabditis elegans
Exon26973   404   I: 10026348-10026751 Caenorhabditis elegans
Exon26976   93   I: 10026796-10026888 Caenorhabditis elegans
Exon26978   834   I: 10027752-10028585 Caenorhabditis elegans
Exon26980   418   I: 10029642-10030059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.3.2 10026188 10030059 1

1 Sequence

Length
1781

1 Sequence Ontology Term

Identifier Name Description
transcript