WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G8.7.2 Sequence Name  F10G8.7.2
Length (nt)  1001   Chromosome Location  I: 10030174-10046371
Chromosome . Primary Identifier  I Chromosome Location . Start  10030174
Chromosome Location . End  10046371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G8.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008665 ercc-1 F10G8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G8.7 F10G8.7 789   I: 10030185-10030239

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.7.2 10030174 10046371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26982   66   I: 10030174-10030239 Caenorhabditis elegans
Exon26990   230   I: 10041911-10042140 Caenorhabditis elegans
Exon26992   72   I: 10042823-10042894 Caenorhabditis elegans
Exon26994   102   I: 10042971-10043072 Caenorhabditis elegans
Exon26996   65   I: 10044023-10044087 Caenorhabditis elegans
Exon26998   120   I: 10045575-10045694 Caenorhabditis elegans
Exon27000   346   I: 10046026-10046371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.7.2 10030174 10046371 1

1 Sequence

Length
1001

1 Sequence Ontology Term

Identifier Name Description
transcript