WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G8.6.1 Sequence Name  F10G8.6.1
Length (nt)  1052   Chromosome Location  I: 10046442-10047977
Chromosome . Primary Identifier  I Chromosome Location . Start  10046442
Chromosome Location . End  10047977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008664 nubp-1 F10G8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G8.6 F10G8.6 942   I: 10046450-10046629

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.6.1 10046442 10047977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27001   188   I: 10046442-10046629 Caenorhabditis elegans
Exon27002   471   I: 10046678-10047148 Caenorhabditis elegans
Exon27004   393   I: 10047585-10047977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.6.1 10046442 10047977 1

1 Sequence

Length
1052

1 Sequence Ontology Term

Identifier Name Description
transcript