WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G8.8a.1 Sequence Name  F10G8.8a.1
Length (nt)  3266   Chromosome Location  I: 10050703-10062026
Chromosome . Primary Identifier  I Chromosome Location . Start  10050703
Chromosome Location . End  10062026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G8.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008666 F10G8.8 F10G8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G8.8a F10G8.8a 2850   I: 10051081-10051081

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.8a.1 10050703 10062026 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27017   379   I: 10050703-10051081 Caenorhabditis elegans
Exon27018   75   I: 10051530-10051604 Caenorhabditis elegans
Exon27020   28   I: 10051996-10052023 Caenorhabditis elegans
Exon27021   116   I: 10052205-10052320 Caenorhabditis elegans
Exon27023   126   I: 10052408-10052533 Caenorhabditis elegans
Exon27025   690   I: 10052940-10053629 Caenorhabditis elegans
Exon27027   182   I: 10053742-10053923 Caenorhabditis elegans
Exon27029   66   I: 10054040-10054105 Caenorhabditis elegans
Exon27031   61   I: 10054419-10054479 Caenorhabditis elegans
Exon27033   263   I: 10054555-10054817 Caenorhabditis elegans
Exon27035   168   I: 10054864-10055031 Caenorhabditis elegans
Exon27037   561   I: 10055374-10055934 Caenorhabditis elegans
Exon27039   255   I: 10056465-10056719 Caenorhabditis elegans
Exon27041   150   I: 10056767-10056916 Caenorhabditis elegans
Exon27043   146   I: 10061881-10062026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G8.8a.1 10050703 10062026 -1

1 Sequence

Length
3266

1 Sequence Ontology Term

Identifier Name Description
transcript