WormMine: Gene WBGene00199505

• WormBase Gene ID: WBGene00199505
• Gene Name: Y106G6C.1
• Sequence Name: Y106G6C.1
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by cep-1 and spr-5 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 135

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00199505

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y106G6C.1	Y106G6C.1	135	I: 10062220-10062354

Other

0 CDSs

0 RNAi Result

5 Allele

• gk962858
• gk962706
• gk963902
• gk963849
• gk962844

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00199505
• Start: 10062220
• End: 10062354
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrI_10062027..10062219
• Length (nt): 193
• Chromosome Location: I: 10062027-10062219
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal
	Transcripts that showed significantly increased expression in spr-5(by101) L1 animals comparing to in N2 control.	DeSeq2 (v.2.11.40.2), p < 0.05.	WBPaper00060886:spr-5(by101)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00199505
• Start: 10062220
• End: 10062354
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 135

1 Sequence Ontology Term