WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0379.3a Sequence Name  B0379.3a
Length (nt)  3165   Chromosome Location  I: 10080162-10080401
Chromosome . Primary Identifier  I Chromosome Location . Start  10080162
Chromosome Location . End  10080401
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0379.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40346 MUT-16, isoform a 119.2 1054 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00038990
WBRNAi00038991
WBRNAi00022267
WBRNAi00094400
WBRNAi00069419
WBRNAi00064247
WBRNAi00064238
WBRNAi00085309
WBRNAi00085308
WBRNAi00085311
WBRNAi00085310
WBRNAi00085312
WBRNAi00069173
WBRNAi00069172
WBRNAi00069174
WBRNAi00069176
WBRNAi00069175

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0379.3a 10080162 10080401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003508 mut-16 B0379.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0379.3a 10080162 10080401 1
CDS:B0379.3a 10080446 10080568 1
CDS:B0379.3a 10080610 10080789 1
CDS:B0379.3a 10080836 10080960 1
CDS:B0379.3a 10081413 10081804 1
CDS:B0379.3a 10081855 10081977 1
CDS:B0379.3a 10082023 10082135 1
CDS:B0379.3a 10082216 10082645 1
CDS:B0379.3a 10082845 10083153 1
CDS:B0379.3a 10083204 10083264 1
CDS:B0379.3a 10083315 10083387 1
CDS:B0379.3a 10083923 10084041 1
CDS:B0379.3a 10084350 10085073 1
CDS:B0379.3a 10085367 10085519 1

1 Sequence

Length
3165

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0379.3a.1 B0379.3a.1 3357   I: 10080159-10085708