WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0379.4c Sequence Name  B0379.4c
Length (nt)  753   Chromosome Location  I: 10086534-10086608
Chromosome . Primary Identifier  I Chromosome Location . Start  10086534
Chromosome Location . End  10086608
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0379.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41191 SCPL-1, isoform c 28.8 250 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00092177
WBRNAi00038993
WBRNAi00022268
WBRNAi00078493
WBRNAi00078494
WBRNAi00107935
WBRNAi00028111
WBRNAi00116897
WBRNAi00077064
WBRNAi00077066
WBRNAi00077065
WBRNAi00077067

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0379.4c 10086534 10086608 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007054 scpl-1 B0379.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0379.4c 10086534 10086608 -1
CDS:B0379.4c 10086788 10086868 -1
CDS:B0379.4c 10086951 10087036 -1
CDS:B0379.4c 10087389 10087488 -1
CDS:B0379.4c 10087843 10087992 -1
CDS:B0379.4c 10088388 10088495 -1
CDS:B0379.4c 10088600 10088752 -1

1 Sequence

Length
753

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0379.4c.1 B0379.4c.1 1030   I: 10086265-10088760