WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y106G6D.5d Sequence Name  Y106G6D.5d
Length (nt)  1660   Chromosome Location  I: 10119563-10121815
Chromosome . Primary Identifier  I Chromosome Location . Start  10119563
Chromosome Location . End  10121815 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6D.5d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014965 Y106G6D.5 Y106G6D.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6D.5d 10119563 10121815 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27163   97   I: 10119563-10119659 Caenorhabditis elegans
Exon27168   127   I: 10119709-10119835 Caenorhabditis elegans
Exon27172   115   I: 10119880-10119994 Caenorhabditis elegans
Exon27174   143   I: 10120039-10120181 Caenorhabditis elegans
Exon27178   217   I: 10120228-10120444 Caenorhabditis elegans
Exon27182   299   I: 10120499-10120797 Caenorhabditis elegans
Exon27186   83   I: 10120845-10120927 Caenorhabditis elegans
Exon27188   171   I: 10121038-10121208 Caenorhabditis elegans
Exon27192   44   I: 10121264-10121307 Caenorhabditis elegans
Exon27196   80   I: 10121352-10121431 Caenorhabditis elegans
Exon27199   202   I: 10121483-10121684 Caenorhabditis elegans
Exon27201   82   I: 10121734-10121815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6D.5d 10119563 10121815 -1

1 Sequence

Length
1660

1 Sequence Ontology Term

Identifier Name Description
transcript