WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A1.16a.1 Sequence Name  C25A1.16a.1
Length (nt)  635   Chromosome Location  I: 10179018-10179747
Chromosome . Primary Identifier  I Chromosome Location . Start  10179018
Chromosome Location . End  10179747 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A1.16a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077526 C25A1.16 C25A1.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A1.16a C25A1.16a 312   I: 10179238-10179318

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.16a.1 10179018 10179747 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27277   301   I: 10179018-10179318 Caenorhabditis elegans
Exon27280   152   I: 10179367-10179518 Caenorhabditis elegans
Exon27283   182   I: 10179566-10179747 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.16a.1 10179018 10179747 1

1 Sequence

Length
635

1 Sequence Ontology Term

Identifier Name Description
transcript