WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A1.11.1 Sequence Name  C25A1.11.1
Length (nt)  1603   Chromosome Location  I: 10193925-10196997
Chromosome . Primary Identifier  I Chromosome Location . Start  10193925
Chromosome Location . End  10196997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A1.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000095 aha-1 C25A1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A1.11 C25A1.11 1362   I: 10194159-10194486

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.11.1 10193925 10196997 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27352   562   I: 10193925-10194486 Caenorhabditis elegans
Exon27353   209   I: 10194972-10195180 Caenorhabditis elegans
Exon27354   242   I: 10195224-10195465 Caenorhabditis elegans
Exon27355   118   I: 10195750-10195867 Caenorhabditis elegans
Exon27356   312   I: 10195919-10196230 Caenorhabditis elegans
Exon27357   109   I: 10196675-10196783 Caenorhabditis elegans
Exon27358   51   I: 10196947-10196997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.11.1 10193925 10196997 -1

1 Sequence

Length
1603

1 Sequence Ontology Term

Identifier Name Description
transcript