WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y106G6E.5a Sequence Name  Y106G6E.5a
Length (nt)  2196   Chromosome Location  I: 10222973-10223114
Chromosome . Primary Identifier  I Chromosome Location . Start  10222973
Chromosome Location . End  10223114
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6E.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27228 CED-12, isoform a 83.1 731 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00055260
WBRNAi00109563
WBRNAi00036519
WBRNAi00109174
WBRNAi00116524
WBRNAi00109272
WBRNAi00109466
WBRNAi00109369
WBRNAi00062538

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y106G6E.5a 10222973 10223114 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000426 ced-12 Y106G6E.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y106G6E.5a 10222973 10223114 -1
CDS:Y106G6E.5a 10223194 10223431 -1
CDS:Y106G6E.5a 10223483 10223709 -1
CDS:Y106G6E.5a 10223755 10224105 -1
CDS:Y106G6E.5a 10224152 10224685 -1
CDS:Y106G6E.5a 10225342 10225619 -1
CDS:Y106G6E.5a 10225958 10226314 -1
CDS:Y106G6E.5a 10226904 10226972 -1

1 Sequence

Length
2196

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y106G6E.5a.1 Y106G6E.5a.1 2288   I: 10222881-10226972